Source: poa
Section: science
Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
DM-Upload-Allowed: yes
Uploaders: Charles Plessy <plessy@debian.org>,
 Andreas Tille <tille@debian.org>
Build-Depends: debhelper (>= 9)
Standards-Version: 3.9.3
Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/poa/trunk/
Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/poa/trunk/
Homepage: http://poamsa.sourceforge.net/

Package: poa
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}
Suggests: blast2
Enhances: t-coffee
Description: Partial Order Alignment for multiple sequence alignment
 POA is Partial Order Alignment, a fast program for multiple sequence
 alignment (MSA) in bioinformatics. Its advantages are speed,
 scalability, sensitivity, and the superior ability to handle branching
 / indels in the alignment. Partial order alignment is an approach to
 MSA, which can be combined with existing methods such as progressive
 alignment. POA optimally aligns a pair of MSAs and which therefore can
 be applied directly to progressive alignment methods such as CLUSTAL.
 For large alignments, Progressive POA is 10-30 times faster than
 CLUSTALW.
